MOLECULAR DETECTION OF STREPTOCOCCUS PNEUMONIAE IN PATIENTS WITH PNEUMONIA IN DIWANIYAH CITY
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Objective: Streptococcus pneumoniae is one of the major causative agents of pneumonia in the world. Toll-like receptor 4 (TLR-4) is essential to the innate immune response because it recognizes molecular patterns linked to pathogens. The study's goal was to identify the diagnostic and prognostic TLR-4 level in pneumonia patients and categorize them according to whether or not S. pneumoniae was present infection through the use of molecular detection (PCR). Materials and Methods: The total number of sample subjects was 100 and they were separated into three groups: patients with S. pneumoniae pneumonia (G1), non-S. pneumoniae pneumonia (G2), and a healthy control group. TLR-4 levels were measured, and PCR-based detection was performed on Genomic DNA extracted from blood samples. The statistical tests included multiple range comparisons, Duncan analysis, and independent T-tests. Results: The mean levels of TLR-4 were significantly higher in both pneumonia groups (G1: 483.19 ± 45.7; G2: 561.05 ± 52.7) compared to the healthy control group (265.17 ± 12.5) (P < 0.05). No significant difference was observed between the two pneumonia groups. ROC analysis revealed that TLR-4 has excellent diagnostic accuracy. For pneumonia with S. pneumoniae, the optimal cutoff value was 336.04 (AUC = 0.880), sensitivity = 87.2%, and specificity = 87.5%. For non-S. pneumoniae pneumonia, AUC = 0.912 at cutoff 378.48. TLR-4 levels did not significantly differ between males (518.90 ± 41.8) and females (504.81 ± 33.9) (P = 0.794). Novelty: TLR-4 is a strong biomarker in the clinical diagnosis of pneumonia, effectively distinguishing patients from healthy individuals, but not differentiating pneumococcal and non-pneumococcal etiologies due to its high sensitivity and specificity.
G. Regev-Yochay et al., “Distribution of 13-valent pneumococcal conjugate vaccine serotype Streptococcus pneumoniae in adults 50 years and older presenting with community-acquired pneumonia in Israel,” Hum. Vaccin. Immunother., vol. 14, no. 10, pp. 2527–2532, 2018.
W. H. Organization, “WHO reveals leading causes of death and disability worldwide: 2000–2019,” 2020.
J. A. Ramirez et al., “Adults hospitalized with pneumonia in the United States: Incidence, epidemiology, and mortality,” Clinical Infectious Diseases, vol. 65, no. 11, pp. 1806–1812, 2017.
R. Harshitha and D. R. Arunraj, “Real-time quantitative PCR: A tool for absolute and relative quantification,” Biochemistry and Molecular Biology Education, vol. 49, no. 5, pp. 800–812, 2021, doi: https://doi.org/10.1002/bmb.21552.
E. Cendejas-Bueno, M. P. Romero-Gómez, and J. Mingorance, “The challenge of molecular diagnosis of bloodstream infections,” World J. Microbiol. Biotechnol., vol. 35, no. 4, p. 65, 2019, doi: https://doi.org/10.1007/s11274-019-2640-y.
S. Schoonbroodt, J. L. Ichanté, S. Boffé, and et al., “Real-time PCR has advantages over culture-based methods in identifying major airway bacterial pathogens in chronic obstructive pulmonary disease: Results from three clinical studies in Europe and North America,” Front. Microbiol., vol. 13, p. 1098133, 2022, doi: https://doi.org/10.3389/fmicb.2022.1098133.
K. Singh, K. A. Mangold, K. Wyant, and et al., “Rectal screening for Klebsiella pneumoniae carbapenemases: Comparison of real-time PCR and culture using two selective screening agar plates,” J. Clin. Microbiol., vol. 50, no. 8, pp. 2596–2600, 2012, doi: https://doi.org/10.1128/JCM.00654-12.
B. Nomanpour, A. Ghodousi, T. Babaei, S. A. Mousavi, S. Asadi, and M. Feizabadi, “Detection and quantification of Streptococcus pneumoniae from Iranian patients with pneumonia and individual carriers by real-time PCR,” Afr. J. Biotechnol., vol. 10, no. 60, pp. 12826–12832, 2011.
K. E. Elberse, S. Nunes, R. Sá-Leão, H. G. van der Heide, and L. M. Schouls, “Multiple-locus variable number tandem repeat analysis for Streptococcus pneumoniae: Comparison with PFGE and MLST,” PLoS One, vol. 6, no. 5, p. e19668, 2011, doi: https://doi.org/10.1371/journal.pone.0019668.
M. da G. Carvalho, M. L. Tondella, K. McCaustland, L. Weidlich, L. McGee, and L. W. et al. Mayer, “Evaluation and improvement of real-time PCR assays targeting lytA, ply, and psaA genes for detection of pneumococcal DNA,” J. Clin. Microbiol., vol. 45, no. 8, pp. 2460–2466, 2007, doi: https://doi.org/10.1128/JCM.02498-06.
H. Z. Al-Banae, K. A. Habib, and K. A. Al-Khurki, “Occurrence of pneumococcal meningitis in Iraq,” Journal of Baghdad for Science, vol. 9, no. 3, pp. 466–471, 2012.
K. Nagai, Y. Shibasaki, K. Hasegawa, T. A. Davies, M. R. Jacobs, and K. Ubukata, “Evaluation of PCR primers to screen for Streptococcus pneumoniae isolates and beta-lactam resistance, and to detect common macrolide resistance determinants,” Journal of Antimicrobial Chemotherapy, vol. 48, no. 6, pp. 915–918, 2001, doi: https://doi.org/10.1093/jac/48.6.915.
A. Tiri et al., “Inborn errors of immunity and cancer,” Biology (Basel)., vol. 10, no. 4, p. 313, 2021, doi: https://doi.org/10.3390/biology10040313.
N. Alsaati, A. Grier, E. Ochfeld, S. McClory, and J. Heimall, “Hematopoietic stem cell transplantation for primary immunodeficiency,” Allergy Asthma Proc., vol. 45, no. 5, pp. 371–383, 2024, doi: https://doi.org/10.2500/aap.2024.45.230079.
F. T. Korkmaz and K. E. Traber, “Innate immune responses in pneumonia,” Pneumonia, vol. 15, no. 1, p. 4, 2023, doi: https://doi.org/10.1186/s41479-023-00106-8.
S. L. Maas, O. Soehnlein, and J. R. Viola, “Organ-Specific Mechanisms of Transendothelial Neutrophil Migration in the Lung, Liver, Kidney, and Aorta,” Front. Immunol., vol. 9, p. 2739, 2018, doi: 10.3389/fimmu.2018.02739.
T. S. Teng, A. L. Ji, X. Y. Ji, and Y. Z. Li, “Neutrophils and Immunity: From Bactericidal Action to Being Conquered,” J. Immunol. Res., vol. 2017, p. 9671604, 2017, doi: 10.1155/2017/9671604.
O. Ochoa-Gondar et al., “Incidence and risk factors of pneumococcal pneumonia in adults: A population-based study,” BMC Pulm. Med., vol. 23, no. 1, p. 200, 2023, doi: https://doi.org/10.1186/s12890-023-02497-2.
X. Luo, Q. Yuan, J. Li, and et al., “Alterations in the prevalence and serotypes of Streptococcus pneumoniae in elderly patients with community-acquired pneumonia: A meta-analysis and systematic review,” Pneumonia, vol. 17, p. 5, 2025, doi: https://doi.org/10.1186/s41479-025-00156-0.
C. Morales-García and et al., “Unusually high incidence of pneumonia in adults: A recent epidemiological observation,” Enferm. Infecc. Microbiol. Clin., 2024, doi: https://doi.org/10.1016/j.eimc.2024.06.003.
S. Peng, H. Ren, J. Deng, and et al., “Genotypic and phenotypic characteristics of Streptococcus pneumoniae from community-acquired pneumonia patients and healthy asymptomatic participants in Sichuan province, China,” BMC Infect. Dis., vol. 21, p. 1030, 2021, doi: https://doi.org/10.1186/s12879-021-06737-w.
J. M. de Miguel-Yanes et al., “Incidence, outcomes and sex-related disparities in pneumonia: A matched-pair analysis with data from Spanish hospitals (2016–2019),” J. Clin. Med., vol. 10, no. 19, p. 4339, 2021, doi: https://doi.org/10.3390/jcm10194339.
R. Sánchez-Tarjuelo et al., “The TLR4-MyD88 signaling axis regulates lung monocyte differentiation pathways in response to Streptococcus pneumoniae,” Front. Immunol., vol. 11, p. 2120, 2020, doi: https://doi.org/10.3389/fimmu.2020.02120.
F. Liu, L. Su, Z. Chen, D. Feng, J. Wei, and J. Sun, “Construction of small molecular CTLA4 analogs with CD80-binding affinity,” Biochem. Biophys. Res. Commun., vol. 513, no. 3, pp. 694–700, 2019, doi: https://doi.org/10.1016/j.bbrc.2019.04.041.
F. Y. Al-Hamdani, K. A. Al-Saad, and A. M. Al-Maliki, “Evaluation of some immunological markers in patients with pneumonia,” J. Infect. Public Health, vol. 16, no. 12, pp. 1905–1912, 2023, doi: https://doi.org/10.1016/j.jiph.2023.09.022.
L. Wang, Y. Wang, H. Cheng, and J. Cheng, “Identifying the driving factors of black bloom in Lake Bay through Bayesian LASSO,” Int. J. Environ. Res. Public Health, vol. 16, no. 14, p. 2492, 2019.
G. Tomlinson et al., “TLR-mediated inflammatory responses to Streptococcus pneumoniae are highly dependent on surface expression of bacterial lipoproteins,” The Journal of Immunology, vol. 193, no. 7, pp. 3736–3745, 2014, doi: https://doi.org/10.4049/jimmunol.1401413.
H. Weighardt, S. Kaiser-Moore, R. M. Vabulas, C. J. Kirschning, H. Wagner, and B. Holzmann, “Toll-like receptor 4 stimulation before or after Streptococcus pneumoniae-induced sepsis improves survival and is dependent on T cells,” PLoS One, vol. 8, no. 12, p. e86015, 2013, doi: https://doi.org/10.1371/journal.pone.0086015.
S. et al., “Demonstrated that the apoptotic response induced by pneumolysin is dependent on TLR4 and plays a protective role against pneumococcal disease,” Unpublished, 2005.
R. V. K. Sairam R.K. and G. C. Srivastava, “Differential response of wheat genotypes to long term salinity stress in relation to oxidative stress, antioxidant activity and osmolyte concentration,” Plant Sci., vol. 163, no. 5, pp. 1037–1046, 2002.
S. R. K. M. R. C. Kholovà J. and G. C. Srivastava, “Response of maize genotypes to salinity stress in relation to osmolytes and metal-ions contents, oxidative stress and antioxidant enzymes activity,” Biol. Plant., vol. 53, no. 2, pp. 249–256, 2009.
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